Submit to Omics Database

We welcome submissions of published multiomics studies relevant to research on Na+/K+-ATPase-related disorders.

The Rare Hope Omics Database does not host raw data. Raw data should remain deposited in an appropriate public repository, such as GEO, PRIDE, or another field-specific repository. The Rare Hope Omics Database instead provides searchable access to published study information and analyzed data to facilitate discovery and comparison across studies.

  • Publication_Template
  • Data_Template
  • No raw data required

  1. Download the template files. Click “Download Template Files” to download the two Excel templates:  “Publication_Template” and “Data_Template”.
  2. Complete the templates. Fill out the sheet named “Template” in each file. Examples from previously entered publications are included in the template files for guidance
  3. Submit the completed files. Click “Submit Files” and select “Database submission” from the subject dropdown menu. If you have questions or were unsure how to complete any part of the templates, include these details in the message field.
  4. Submission review. 
    A reviewer will assess the submitted files for completeness and check the metadata and data formatting.
  5. Review and approval.
    You will receive an email either requesting clarification or additional information, or confirming that the submission is ready for your final approval. Following approval, the study and data will be added to the database.
    • About the Template files
      1. Submissions use two excel files:
      2. The Publication_Template contains information describing the publication and experiment, including the DOI, authors, experiment type, and sample information. The requested metadata are structured using established omics database conventions, where applicable. In addition to the Template sheet to be completed by the submitter, the file contains examples from previously entered publications for guidance.
      3. The Data_Template contains the analyzed omics data associated with the study, such as gene, protein, metabolite, or lipid identifiers, accession IDs, p-values, and fold changes. Because the structure and terminology of analyzed data can vary substantially between studies, the template is designed to retain the structure of the original dataset while providing standardized annotations for searching:
        1. Copy your analyzed data table into the template starting at cell A3.
        2. Use the dropdown menus in Row 1 to assign a standardized category to each relevant column.
        3. Use Row 2 to provide a more specific description of the contents of each column.

        Examples of previously entered datasets are included in the file for guidance.

Complete as much of the template as you can. If you are unsure about a field or cannot provide the requested information, please indicate the relevant cells or sections in the message accompanying your submission. A reviewer will check these areas during the submission review and can provide guidance where needed. Feedback about unclear fields or difficulties with the submission process is also welcome and helps us improve the templates and submission process.

If your publication contains more than one type of omics experiment – for example transcriptomics and proteomics or bulk RNA-sequencing and single cell RNA-sequencing – complete a separate template file for each experiment type. Some information in the Publication_Template file will be repeated across experiments from the same publication. 

Yes. We welcome suggestions of relevant publications that are not yet included in the Rare Hope Omics Database.

Click “Submit” and select “Publication suggestion” from the subject dropdown menu. You do not need to complete the database submission templates when simply suggesting a publication.

  Download Template Files (.zip)

  Submit Templates Files (.xlsx)